| Standings | P | W | D | L | GD | PTS | |
|---|---|---|---|---|---|---|---|
| 1 | Zenit St. Petersburg II | 28 | 23 | 4 | 1 | 40 | 73 |
| 2 | Dinamo Vologda | 28 | 18 | 5 | 5 | 23 | 59 |
| 3 | Spartak Moscow II | 28 | 13 | 5 | 10 | 10 | 44 |
| 4 | Irkutsk | 28 | 12 | 8 | 8 | 7 | 44 |
| 5 | Baltika II | 28 | 10 | 10 | 8 | 9 | 40 |
| 6 | Torpedo Vladimir | 28 | 8 | 12 | 8 | -2 | 36 |
| 7 | Tver FC | 28 | 9 | 9 | 10 | -4 | 36 |
| 8 | Leon Saturn Ramenskoye | 28 | 9 | 8 | 11 | -7 | 35 |
| 9 | Cherepovets | 28 | 9 | 6 | 13 | -8 | 33 |
| 10 | Chertanovo Moscow | 28 | 8 | 8 | 12 | -2 | 32 |
| 11 | Zvezda Saint Petersburg | 28 | 7 | 10 | 11 | -4 | 31 |
| 12 | Luki-Energiya | 28 | 7 | 9 | 12 | -5 | 30 |
| 13 | FC Kosmos Dolgoprudny | 28 | 7 | 8 | 13 | -5 | 29 |
| 14 | FC Yenisey Krasnoyarsk II | 28 | 6 | 7 | 15 | -30 | 25 |
| 15 | Kolomna | 28 | 4 | 11 | 13 | -22 | 23 |